PUBLICATIONS
2016
Orger MB, Portugues R. (2016) Correlating Whole Brain Neural Activity with Behavior in Head-Fixed Larval Zebrafish. Methods Mol Biol 1451 , 307-320 (doi:10.1007/978-1-4939-3771-4_21) PDF
Orger MB. (2016) The Cellular Organization of Zebrafish Visuomotor Circuits Curr. Biol. 26 (9), R377-R385 (doi:10.1016/j.cub.2016.03.054) PDF
2015
Feierstein Claudia E, Portugues Ruben, Orger Michael B. (2015) Seeing the whole picture: A comprehensive imaging approach to functional mapping of circuits in behaving zebrafish Neuroscience 296 , 26-38 PDF
2014
Severi KE, Portugues R, Marques JC, O’Malley DM, Orger MB, Engert F. (2014) Neural Control and Modulation of Swimming Speed in the Larval Zebrafish Neuron 83 (2), 00578-9 (doi:10.1016/j.neuron.2014.06.032) PDF
Portugues R, Feierstein CE, Engert F, Orger MB (2014) Whole-Brain Activity Maps Reveal Stereotyped, Distributed Networks for Visuomotor Behavior Neuron 81 (6), 1328-1343 (doi:10.1016/j.neuron.2014.01.019) PDF
2013
Tsai-Wen Chen, Trevor J. Wardill, Yi Sun, Stefan R. Pulver, Sabine L. Renninger, Amy Baohan, Eric R. Schreiter, Rex A. Kerr, Michael B. Orger, Vivek Jayaraman, Loren L. Looger, Karel Svoboda & Douglas S. Kim (2013) Ultrasensitive fluorescent proteins for imaging neuronal activity Nature (499), 295–300 (doi:10.1038/nature12354) PDF
Renninger SL, Orger MB. (2013) Two-photon imaging of neural population activity in zebrafish. Methods S1046-2023 (13), 00166-7 (doi:10.1016/j.ymeth.2013.05.016) PDF
Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li & Philipp J Keller (2013) Whole-brain functional imaging at cellular resolution using light-sheet microscopy Nat. Methods (doi:10.1038/nmeth.2434) PDF
Jasper Akerboom, Nicole Carreras Calderón, Lin Tian, Sebastian Wabnig, Matthias Prigge, Johan Tolö, Andrew Gordus, Michael B. Orger, Kristen E. Severi, John J. Macklin, Ronak Patel, Stefan R. Pulver, Trevor J. Wardill, Elisabeth Fisch (2013) Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Front. Mol. Neurosci. (doi:10.3389/fnmol.2013.00002) PDF
Marvin JS, Borghuis BG, Tian L, Cichon J, Harnett MT, Akerboom J, Gordus A, Renninger SL, Chen TW, Bargmann CI, Orger MB, Schreiter ER, Demb JB, Gan WB, Hires SA, Looger LL. (2013) An optimized fluorescent probe for visualizing glutamate neurotransmission. Nat. Methods (doi:10.1038/nmeth.2333) PDF
2012
Akerboom J, Mutlu S, Orger MB et al Looger LL. (2012) Optimization of a GCaMP Calcium Indicator for Neural Activity Imaging. J. Neurosci. 32 (40), 13819-13840 (doi:10.1523/?JNEUROSCI.2601-12.2012 ) PDF
Bianco IH, Ma LH, Schoppik D, Robson DN, Orger MB, Beck JC, Li JM, Schier AF, Engert F, Baker R (2012) The Tangential Nucleus Controls a Gravito-inertial Vestibulo-ocular Reflex Curr. Biol. (doi:10.1016/j.cub.2012.05.026) PDF
Ahrens MB, Li JM, Orger MB, Robson DN, Schier AF, Engert F, Portugues R. (2012) Brain-wide neuronal dynamics during motor adaptation in zebrafish. Nature 485 (7399), 471-7 (doi:10.1038/nature11057) PDF
2008
Orger MB, Kampff AR, Severi KE, Bollmann JH, Engert F (2008) Control of visual behavior by distinct populations of spinal projection neurons. Nat. Neurosci. 11 (3), 327-333 (doi:10.1038/nn2048) PDF
2007
Smear MC, Tao HW, Staub W, Orger MB, Gosse NJ, Liu Y, Takahashi K, Poo MM, Baier H (2007) Vesicular glutamate transport at a central synapse limits the acuity of visual perception in zebrafish. Neuron 53 (1), 65-77 (doi:10.1016/j.neuron.2006.12.013) PDF
2005
Muto A, Orger MB, Wehman A, Smear MC, Kay JN, Page-McCaw P, Gahtan E, Xiao T, Nevin LM, Gosse NJ, Staub W, Finger-Baier K, Baier H (2005) Forward genetic analysis of visual behaviors in zebrafish. PLoS Genet. 1 (5), e66 (doi:10.1371/journal.pgen.0010066) PDF
Orger MB & Baier H (2005) Channeling of red and green cone inputs to the zebrafish optomotor response. Vis. Neurosci. 22 (3), 275-81 (doi:10.1017/S0952523805223039) PDF
2004
Orger MB, Gahtan E, Muto A, Page-McCaw P, Smear MC, Baier H (2004) Behavioral screening assays in zebrafish. Methods Cell Biol. 77 , 53-68 PDF
2000
Orger MB, Smear MC, Anstis SM, Baier H (2000) Perception of Fourier and non-Fourier motion by larval zebrafish. Nat. Neurosci. 3 (11), 1128-1133 (doi:10.1038/80649) PDF