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PUBLICATIONS

2016

Orger MB, Portugues R. (2016) Correlating Whole Brain Neural Activity with Behavior in Head-Fixed Larval Zebrafish. Methods Mol Biol 1451 , 307-320 (doi:10.1007/978-1-4939-3771-4_21) PDF

Orger MB. (2016) The Cellular Organization of Zebrafish Visuomotor Circuits Curr. Biol. 26 (9), R377-R385 (doi:10.1016/j.cub.2016.03.054) PDF

 

2015

Feierstein Claudia E, Portugues Ruben, Orger Michael B. (2015) Seeing the whole picture: A comprehensive imaging approach to functional mapping of circuits in behaving zebrafish Neuroscience 296 , 26-38 PDF

 

2014

Severi KE, Portugues R, Marques JC, O’Malley DM, Orger MB, Engert F. (2014) Neural Control and Modulation of Swimming Speed in the Larval Zebrafish Neuron 83 (2), 00578-9 (doi:10.1016/j.neuron.2014.06.032) PDF

Portugues R, Feierstein CE, Engert F, Orger MB (2014) Whole-Brain Activity Maps Reveal Stereotyped, Distributed Networks for Visuomotor Behavior Neuron 81 (6), 1328-1343 (doi:10.1016/j.neuron.2014.01.019) PDF

 

2013

Tsai-Wen Chen, Trevor J. Wardill, Yi Sun, Stefan R. Pulver, Sabine L. Renninger, Amy Baohan, Eric R. Schreiter, Rex A. Kerr, Michael B. Orger, Vivek Jayaraman, Loren L. Looger, Karel Svoboda & Douglas S. Kim (2013) Ultrasensitive fluorescent proteins for imaging neuronal activity Nature (499), 295–300 (doi:10.1038/nature12354) PDF

Renninger SL, Orger MB. (2013) Two-photon imaging of neural population activity in zebrafish. Methods S1046-2023 (13), 00166-7 (doi:10.1016/j.ymeth.2013.05.016) PDF

Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li & Philipp J Keller (2013) Whole-brain functional imaging at cellular resolution using light-sheet microscopy Nat. Methods (doi:10.1038/nmeth.2434) PDF

Jasper Akerboom, Nicole Carreras Calderón, Lin Tian, Sebastian Wabnig, Matthias Prigge, Johan Tolö, Andrew Gordus, Michael B. Orger, Kristen E. Severi, John J. Macklin, Ronak Patel, Stefan R. Pulver, Trevor J. Wardill, Elisabeth Fisch (2013) Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Front. Mol. Neurosci. (doi:10.3389/fnmol.2013.00002) PDF

Marvin JS, Borghuis BG, Tian L, Cichon J, Harnett MT, Akerboom J, Gordus A, Renninger SL, Chen TW, Bargmann CI, Orger MB, Schreiter ER, Demb JB, Gan WB, Hires SA, Looger LL. (2013) An optimized fluorescent probe for visualizing glutamate neurotransmission. Nat. Methods (doi:10.1038/nmeth.2333) PDF

 

2012

Akerboom J, Mutlu S, Orger MB et al Looger LL. (2012) Optimization of a GCaMP Calcium Indicator for Neural Activity Imaging. J. Neurosci. 32 (40), 13819-13840 (doi:10.1523/?JNEUROSCI.2601-12.2012 ) PDF

Bianco IH, Ma LH, Schoppik D, Robson DN, Orger MB, Beck JC, Li JM, Schier AF, Engert F, Baker R (2012) The Tangential Nucleus Controls a Gravito-inertial Vestibulo-ocular Reflex Curr. Biol. (doi:10.1016/j.cub.2012.05.026) PDF

Ahrens MB, Li JM, Orger MB, Robson DN, Schier AF, Engert F, Portugues R. (2012) Brain-wide neuronal dynamics during motor adaptation in zebrafish. Nature 485 (7399), 471-7 (doi:10.1038/nature11057) PDF

 

2008

Orger MB, Kampff AR, Severi KE, Bollmann JH, Engert F (2008) Control of visual behavior by distinct populations of spinal projection neurons. Nat. Neurosci. 11 (3), 327-333 (doi:10.1038/nn2048) PDF

 

2007

Smear MC, Tao HW, Staub W, Orger MB, Gosse NJ, Liu Y, Takahashi K, Poo MM, Baier H (2007) Vesicular glutamate transport at a central synapse limits the acuity of visual perception in zebrafish. Neuron 53 (1), 65-77 (doi:10.1016/j.neuron.2006.12.013) PDF

 

2005

Muto A, Orger MB, Wehman A, Smear MC, Kay JN, Page-McCaw P, Gahtan E, Xiao T, Nevin LM, Gosse NJ, Staub W, Finger-Baier K, Baier H (2005) Forward genetic analysis of visual behaviors in zebrafish. PLoS Genet. 1 (5), e66 (doi:10.1371/journal.pgen.0010066) PDF

Orger MB & Baier H (2005) Channeling of red and green cone inputs to the zebrafish optomotor response. Vis. Neurosci. 22 (3), 275-81 (doi:10.1017/S0952523805223039) PDF

 

2004

Orger MB, Gahtan E, Muto A, Page-McCaw P, Smear MC, Baier H (2004) Behavioral screening assays in zebrafish. Methods Cell Biol. 77 , 53-68 PDF

 

2000

Orger MB, Smear MC, Anstis SM, Baier H (2000) Perception of Fourier and non-Fourier motion by larval zebrafish. Nat. Neurosci. 3 (11), 1128-1133 (doi:10.1038/80649) PDF